STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32624.1[K] COG1733 Predicted transcriptional regulators. (174 aa)    
Predicted Functional Partners:
EED32625.1
Class II aldolase/adducin family protein; [G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
       0.577
NOR53_796
Putative 'Cold-shock' DNA-binding domain protein; [K] COG1278 Cold shock proteins.
       0.522
EED31204.1
Conserved hypothetical protein; [T] COG2337 Growth inhibitor.
   
    0.521
EED32020.1
Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators.
  
  
 0.448
EED31184.1
Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator.
  
     0.445
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.