STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32966.1D-aminoacylase (N-acyl-D-amino-acid deacylase); [F] COG0044 Dihydroorotase and related cyclic amidohydrolases. (538 aa)    
Predicted Functional Partners:
EED32967.1
Zinc carboxypeptidase family; [E] COG2866 Predicted carboxypeptidase.
 
     0.824
EED32965.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
       0.613
sulP
[R] COG2252 Permeases.
       0.444
EED32968.1
Beta-lactamase domain protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.444
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
       0.444
EED32971.1
Hypothetical protein.
       0.426
EED32964.1
Sodium/sulphate symporter; [P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases.
       0.424
EED32963.1
Conserved hypothetical protein.
       0.422
EED33229.1
Conserved hypothetical protein; [S] COG3949 Uncharacterized membrane protein.
 
     0.402
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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