STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggt_1[E] COG0405 Gamma-glutamyltransferase. (613 aa)    
Predicted Functional Partners:
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
     
 0.730
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.649
cphA
Cyanophycin synthetase; [M] COG0769 UDP-N-acetylmuramyl tripeptide synthase.
    
  0.645
ggt_2
[E] COG0405 Gamma-glutamyltransferase.
  
  
 
0.547
EED33685.1
Hypothetical protein; [O] COG0501 Zn-dependent protease with chaperone function; putative peptidase M48Ste24p taxon:279238.
       0.536
EED33687.1
BNR/Asp-box repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.529
ggt_3
[E] COG0405 Gamma-glutamyltransferase.
  
  
 
0.528
EED32210.1
[EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
  
 
 0.476
EED33690.1
[Q] COG2175 Probable taurine catabolism dioxygenase.
    
  0.471
gshB
Glutathione synthase; [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the prokaryotic GSH synthase family.
    
 0.424
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.