Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33561.1SapC family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (252 aa)    
Predicted Functional Partners:
NOR53_979
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.955
EED33562.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.944
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.908
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.884
EED31609.1
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.781
EED31623.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.617
EED33558.1
Conserved hypothetical protein; [S] COG3821 Predicted membrane protein.
 
     0.586
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
    
  0.573
EED31208.1
[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.491
NOR53_908
[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.491
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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