STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33244.1Methyltransferase, FkbM family; [QR] COG0500 SAM-dependent methyltransferases. (277 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.719
fabB
[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.697
EED33243.1
Nitroreductase family protein; [C] COG0778 Nitroreductase.
  
 
  0.592
EED33246.1
Hypothetical protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins; helix-turn-helix, AraC type.
       0.468
NOR53_207
[S] COG3551 Uncharacterized protein conserved in bacteria.
 
 
 0.438
EED33242.1
delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
       0.409
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.404
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.