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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32958.1Conserved domain protein. (327 aa)    
Predicted Functional Partners:
suhB
SuhB inositol monophosphatase; [P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase.
 
     0.924
hom
[E] COG0460 Homoserine dehydrogenase.
    
 0.686
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.679
EED33180.1
Conserved hypothetical protein.
  
     0.544
EED32957.1
Conserved hypothetical protein.
       0.518
NOR53_906
N-methyl-l-tryptophan oxidase (mtox); [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.501
EED32960.1
General secretion pathway protein J; [J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase).
       0.458
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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