STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33348.1[GEPR] COG0477 Permeases of the major facilitator superfamily. (383 aa)    
Predicted Functional Partners:
hom
[E] COG0460 Homoserine dehydrogenase.
   
  0.660
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.594
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.590
NOR53_69
Pe_pgrs family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.588
EED32965.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.576
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
   
 
 0.572
EED32548.1
Conserved hypothetical protein.
  
     0.570
EED33023.1
Twin-arginine translocation pathway signal; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.545
EED31772.1
Acyltransferase family protein; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
  
  0.540
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.523
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.