STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_147[R] COG0661 Predicted unusual protein kinase; ABC-1. (442 aa)    
Predicted Functional Partners:
NOR53_115
ABC-1 domain protein; [R] COG0661 Predicted unusual protein kinase.
 
    
0.827
NOR53_59
Photolyase; [R] COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
     0.781
NOR53_4
acyl-CoA dehydrogenase, C-terminal domain; [I] COG1960 Acyl-CoA dehydrogenases.
       0.554
acd
[I] COG1960 Acyl-CoA dehydrogenases.
       0.544
petB
ubiquinol-Cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
  
 0.477
NOR53_178
[I] COG1960 Acyl-CoA dehydrogenases.
       0.444
NOR53_333
[O] COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
       0.444
EED33331.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
 0.415
bchM
Magnesium protoporphyrin O-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases.
  
 
 0.402
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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