STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33939.1Conserved hypothetical protein. (199 aa)    
Predicted Functional Partners:
EED31811.1
ABC transporter, inner membrane protein; [V] COG0842 ABC-type multidrug transport system, permease component.
  
 
 0.867
NOR53_844
Transferase hexapeptide repeat containing protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
       0.574
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.551
NOR53_682
Eight transmembrane protein EpsH; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.551
EED33941.1
Conserved hypothetical protein; [R] COG0457 FOG: TPR repeat.
       0.538
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
 
 0.504
EED32254.1
Conserved hypothetical protein.
  
 
 0.503
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
   
 
  0.456
EED33938.1
Conserved hypothetical protein.
       0.448
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
 
  0.445
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.