STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32881.1Hypothetical protein; [S] COG2135 Uncharacterized conserved protein; Belongs to the SOS response-associated peptidase family. (234 aa)    
Predicted Functional Partners:
NOR53_753
[Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; putative uncharacterized domain 1.
       0.648
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.516
EED33265.1
Site-specific recombinase, phage integrase family; [L] COG0582 Integrase.
   
    0.516
EED31311.1
Phage integrase family protein; [L] COG4973 Site-specific recombinase XerC; Belongs to the 'phage' integrase family.
   
    0.516
EED31248.1
Phage integrase family protein; [L] COG0582 Integrase; Belongs to the 'phage' integrase family.
   
    0.516
NOR53_674
Phage integrase family protein; [L] COG0582 Integrase; Belongs to the 'phage' integrase family.
   
    0.516
EED32879.1
[J] COG0216 Protein chain release factor A.
       0.431
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.