STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32847.1Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins. (313 aa)    
Predicted Functional Partners:
EED31331.1
Transcriptional regulator, XRE family; [K] COG1396 Predicted transcriptional regulators.
  
 0.858
flgG
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.797
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
  
 
 0.752
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
 
 
 0.752
EED34043.1
Transcriptional regulator, GntR family; [K] COG2188 Transcriptional regulators.
  
  
 0.709
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
    
  0.707
EED31823.1
AraC protein, arabinose-binding/dimerisation; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.664
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
 0.654
EED32848.1
[Q] COG2124 Cytochrome P450.
 
 
   0.634
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 0.612
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.