STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33110.1Conserved hypothetical protein; [R] COG3313 Predicted Fe-S protein. (158 aa)    
Predicted Functional Partners:
EED33109.1
tRNA--hydroxylase; [FJ] COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA.
 
     0.873
NOR53_921
[V] COG3725 Membrane protein required for beta-lactamase induction.
  
     0.754
EED32460.1
Outer membrane protein; [S] COG2135 Uncharacterized conserved protein.
  
     0.718
EED32439.1
[M] COG3317 Uncharacterized lipoprotein.
  
     0.706
NOR53_861
Putative Rieske (2Fe-2S) domain protein; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
     0.679
EED32681.1
Conserved hypothetical protein; [R] COG3897 Predicted methyltransferase.
  
     0.677
EED33901.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.650
NOR53_365
Conserved hypothetical protein.
  
     0.600
EED31931.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.568
EED31877.1
Conserved hypothetical protein TIGR02449; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.558
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.