STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33943.1Conserved hypothetical protein. (830 aa)    
Predicted Functional Partners:
EED33944.1
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.914
EED33945.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.827
EED33947.1
Conserved hypothetical protein.
 
     0.823
EED33946.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.819
NOR53_735
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.747
EED32523.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport; overlaps another CDS with the same product name.
  
     0.737
EED33941.1
Conserved hypothetical protein; [R] COG0457 FOG: TPR repeat.
 
     0.678
EED32524.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport; overlaps another CDS with the same product name.
  
     0.678
NOR53_844
Transferase hexapeptide repeat containing protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.678
NOR53_682
Eight transmembrane protein EpsH; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.645
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.