Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED32548.1Conserved hypothetical protein. (293 aa)    
Predicted Functional Partners:
EED32617.1
ABC transporter, permease protein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.759
NOR53_265
Conserved hypothetical protein.
  
     0.747
EED34037.1
Conserved hypothetical protein.
  
     0.745
EED31615.1
Conserved hypothetical protein.
  
     0.745
EED31435.1
Conserved hypothetical protein.
  
     0.712
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.706
EED31461.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.696
NOR53_69
Pe_pgrs family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.692
NOR53_192
Hypothetical protein.
  
     0.687
EED32547.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; [O] COG1404 Subtilisin-like serine proteases.
  
     0.678
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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