Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33711.1Choline-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes. (464 aa)    
Predicted Functional Partners:
atsA
[P] COG3119 Arylsulfatase A and related enzymes.
  
  
  0.825
EED33710.1
Acetyltransferase, gnat family; [J] COG0752 Glycyl-tRNA synthetase, alpha subunit.
       0.613
NOR53_998
Putative alpha-galactosidase 2 (Melibiase); [G] COG3345 Alpha-galactosidase.
  
  
  0.522
EED31740.1
[P] COG3119 Arylsulfatase A and related enzymes.
 
  
 
0.515
EED31113.1
Steryl-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
 
  
 
0.513
EED31112.1
N-acetylgalactosamine-6-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
 
  
 
0.512
EED31111.1
Steryl-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
 
  
 
0.511
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 
  0.495
NOR53_867
[P] COG3119 Arylsulfatase A and related enzymes.
  
  
 
0.479
EED33709.1
Rieske (2Fe-2S) domain protein; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
     0.477
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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