STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33155.1[I] COG1960 Acyl-CoA dehydrogenases. (378 aa)    
Predicted Functional Partners:
EED33156.1
[I] COG1960 Acyl-CoA dehydrogenases.
     0.966
EED31432.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
     0.933
acd
[I] COG1960 Acyl-CoA dehydrogenases.
     0.916
NOR53_272
[I] COG1960 Acyl-CoA dehydrogenases.
 
     0.915
fadJ
Fatty acid oxidation complex, alpha subunit; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.913
fadB
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.913
NOR53_708
[I] COG1960 Acyl-CoA dehydrogenases.
  
     0.741
NOR53_911
[I] COG1960 Acyl-CoA dehydrogenases.
  
     0.732
NOR53_178
[I] COG1960 Acyl-CoA dehydrogenases.
 
     0.718
EED33210.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
     0.708
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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