STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32755.1PspC domain family protein; [KT] COG1983 Putative stress-responsive transcriptional regulator. (189 aa)    
Predicted Functional Partners:
pspB
Phage shock protein B; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.999
pspA
Phage shock protein A; [NT] COG0840 Methyl-accepting chemotaxis protein.
 
 
 0.997
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
   
 
 0.975
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
  
 
 0.974
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
   
 
 0.974
NOR53_690
Hypothetical protein.
   
 
 0.715
EED31615.1
Conserved hypothetical protein.
  
     0.689
EED34037.1
Conserved hypothetical protein.
  
     0.677
EED31435.1
Conserved hypothetical protein.
  
     0.609
NOR53_192
Hypothetical protein.
  
   
 0.586
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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