STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED34028.1Conserved hypothetical protein; [S] COG3016 Uncharacterized iron-regulated protein. (284 aa)    
Predicted Functional Partners:
napA_2
[P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
       0.634
EED32287.1
Conserved hypothetical protein.
  
     0.568
EED32279.1
Mo-co oxidoreductase dimerisation domain; [R] COG2041 Sulfite oxidase and related enzymes.
  
  
  0.551
soxC
[R] COG2041 Sulfite oxidase and related enzymes.
  
  
  0.533
EED31952.1
Transcriptional regulator, MarR family; [K] COG1846 Transcriptional regulators.
  
     0.529
NOR53_798
Putative rhodanese domain protein; [R] COG2391 Predicted transporter component.
  
  
  0.524
EED34030.1
Conserved hypothetical protein.
 
     0.486
EED34027.1
Carboxylesterase 1; [R] COG0400 Predicted esterase.
       0.482
NOR53_935
Aminotransferase, classes I and II; [E] COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase.
  
  
  0.453
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.