STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32523.1[P] COG1629 Outer membrane receptor proteins, mostly Fe transport; overlaps another CDS with the same product name. (400 aa)    
Predicted Functional Partners:
EED32524.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport; overlaps another CDS with the same product name.
     0.994
EED32529.1
[F] COG5042 Purine nucleoside permease.
 
     0.806
EED33943.1
Conserved hypothetical protein.
  
     0.737
EED33944.1
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.732
EED32528.1
[F] COG1816 Adenosine deaminase.
 
     0.724
EED32530.1
[F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family.
 
     0.715
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.675
EED33945.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
  
     0.566
EED32526.1
Putative urate catabolism protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
 
     0.539
EED32525.1
Purine nucleoside permease; [S] COG3542 Uncharacterized conserved protein.
 
     0.529
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.