Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33573.1Voltage-gated potassium channel beta subunit; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (322 aa)    
Predicted Functional Partners:
erg
[I] COG3000 Sterol desaturase.
       0.737
EED33572.1
Hypothetical protein.
       0.682
EED31727.1
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
     0.674
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.555
EED32554.1
Udp-glucose 6-dehydrogenase; [M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
   
 
  0.538
EED34014.1
[C] COG0371 Glycerol dehydrogenase and related enzymes.
     
  0.531
EED32558.1
[KG] COG1940 Transcriptional regulator/sugar kinase.
     
  0.531
EED33575.1
Dsba oxidoreductase; [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase.
       0.459
EED33674.1
[I] COG0657 Esterase/lipase.
  
 
 0.457
spt
[HE] COG1932 Phosphoserine aminotransferase.
   
 
  0.443
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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