Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED32436.1ABC transporter permease protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component. (369 aa)    
Predicted Functional Partners:
EED32435.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.999
EED32434.1
Paraquat-inducible protein B; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 0.990
EED32348.1
Glycine betaine/L-proline ABC transporter, permease and substrate-binding protein; [M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
     
  0.965
EED33884.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  
  0.950
EED31237.1
Transposase, Mutator family; Required for the transposition of the insertion element.
  
 0.936
EED32833.1
[V] COG0842 ABC-type multidrug transport system, permease component.
    
  0.919
EED32687.1
Permease YjgP/YjgQ family protein; [R] COG0795 Predicted permeases.
     
 0.919
EED32125.1
[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
   
 0.916
EED31679.1
Glycosyl transferase WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
   
 0.916
NOR53_774
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
   
 0.916
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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