STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33309.1Response regulator receiver protein; [T] COG0784 FOG: CheY-like receiver. (396 aa)    
Predicted Functional Partners:
NOR53_774
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
 
 0.993
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.978
EED32126.1
Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
 
 0.975
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.970
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.966
EED32125.1
[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
 0.897
EED31679.1
Glycosyl transferase WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
  
 0.870
flgJ
Flagellar rod assembly protein/muramidase FlgJ; [NU] COG1705 Muramidase (flagellum-specific).
   
    0.836
EED31683.1
Putative Heme NO binding; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
    0.831
EED32335.1
Hypothetical protein; [T] COG2200 FOG: EAL domain; pas:ggdef.
  
 
 0.775
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.