Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33407.1Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component. (260 aa)    
Predicted Functional Partners:
EED33409.1
[G] COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.999
EED33406.1
[G] COG1175 ABC-type sugar transport systems, permease components.
 
 0.999
EED33405.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC 1; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.998
EED33404.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC 3; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.997
NOR53_930
Hypothetical protein; [S] COG5477 Predicted small integral membrane protein.
 
    0.959
EED32687.1
Permease YjgP/YjgQ family protein; [R] COG0795 Predicted permeases.
     
  0.677
EED33884.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
     
  0.670
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 
  0.607
ccmC
Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
     
  0.588
EED32785.1
Putative heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
     
  0.588
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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