Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33709.1Rieske (2Fe-2S) domain protein; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit. (372 aa)    
Predicted Functional Partners:
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
 
 
 0.896
etfA
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
  
 
  0.679
EED34039.1
Putative NADH oxidase; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.652
fadH
2,4-dienoyl-CoA reductase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.652
EED33708.1
N-carbamoyl-L-amino acid hydrolase (L-carbamoylase); [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.603
EED34003.1
Sulfide dehydrogenase (flavocytochrome c) flavoprotein chain; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
  
 
 0.587
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
  
 
 0.587
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
     
  0.557
EED33437.1
Putative metapyrocatechase 2; [E] COG0346 Lactoylglutathione lyase and related lyases.
  
     0.547
EED31694.1
[F] COG0167 Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family.
  
 
 0.532
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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