Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EED32968.1Beta-lactamase domain protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases. (300 aa)    
Predicted Functional Partners:
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
 
 
  0.948
sulP
[R] COG2252 Permeases.
 
     0.898
EED32741.1
[S] COG3453 Uncharacterized protein conserved in bacteria.
 
     0.746
EED32971.1
Hypothetical protein.
       0.737
EED32360.1
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
 
  0.662
NOR53_764
Gene II and x protein; [R] COG2391 Predicted transporter component.
 
     0.604
NOR53_686
YeeE/YedE; [R] COG2391 Predicted transporter component.
 
     0.582
cho
[L] COG0322 Nuclease subunit of the excinuclease complex.
    
  0.555
EED32127.1
[E] COG0346 Lactoylglutathione lyase and related lyases.
   
  0.538
dnaQ
DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
    
  0.528
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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