STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32968.1Beta-lactamase domain protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases. (300 aa)    
Predicted Functional Partners:
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
 
 
  0.954
sulP
[R] COG2252 Permeases.
     0.885
EED32971.1
Hypothetical protein.
       0.737
EED32741.1
[S] COG3453 Uncharacterized protein conserved in bacteria.
 
     0.712
EED32360.1
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
 
  0.658
EED32159.1
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
  
  0.626
NOR53_626
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
  
  0.626
EED33782.1
Thiosulfate sulfurtransferase (Rhodanese); [P] COG2897 Rhodanese-related sulfurtransferase.
   
 
 0.573
EED32990.1
Sulphite reductase; [C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
     
 0.569
cysH
Phosphoadenosine-phosphosulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.568
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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