STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32536.1Nickel-dependent hydrogenases b-type cytochrome subunit family; [C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit. (670 aa)    
Predicted Functional Partners:
NOR53_798
Putative rhodanese domain protein; [R] COG2391 Predicted transporter component.
 
  
  0.968
EED32537.1
[C] COG2863 Cytochrome c553.
 
     0.952
EED32535.1
Conserved hypothetical protein; [R] COG2391 Predicted transporter component.
 
     0.944
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
    
  0.671
EED32273.1
YeeE/YedE family protein; [R] COG2391 Predicted transporter component; overlaps another CDS with the same product name.
  
  
  0.654
EED33782.1
Thiosulfate sulfurtransferase (Rhodanese); [P] COG2897 Rhodanese-related sulfurtransferase.
    
  0.591
EED33502.1
Cysteine-rich domain protein; [C] COG0247 Fe-S oxidoreductase.
     
 0.572
EED32280.1
Cytochrome c, class I; [C] COG3245 Cytochrome c5.
    
  0.572
EED32254.1
Conserved hypothetical protein.
  
     0.568
EED32538.1
Hypothetical protein.
       0.539
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.