Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32536.1Nickel-dependent hydrogenases b-type cytochrome subunit family; [C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit. (670 aa)    
Predicted Functional Partners:
NOR53_798
Putative rhodanese domain protein; [R] COG2391 Predicted transporter component.
 
  
  0.967
EED32537.1
[C] COG2863 Cytochrome c553.
 
     0.958
EED32535.1
Conserved hypothetical protein; [R] COG2391 Predicted transporter component.
 
     0.943
EED33782.1
Thiosulfate sulfurtransferase (Rhodanese); [P] COG2897 Rhodanese-related sulfurtransferase.
    
  0.663
EED32990.1
Sulphite reductase; [C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
     
  0.647
cysM
Cysteine synthase B; [E] COG0498 Threonine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
  0.647
EED32273.1
YeeE/YedE family protein; [R] COG2391 Predicted transporter component; overlaps another CDS with the same product name.
  
  
  0.608
EED32254.1
Conserved hypothetical protein.
  
     0.568
NOR53_136
Molydopterin dinucleotide-binding region; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.566
EED31452.1
Oxidoreductase, molybdopterin-binding; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.566
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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