STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33428.1[G] COG1874 Beta-galactosidase. (651 aa)    
Predicted Functional Partners:
NOR53_998
Putative alpha-galactosidase 2 (Melibiase); [G] COG3345 Alpha-galactosidase.
 
  
 0.959
EED33429.1
Galactokinase; [I] COG1577 Mevalonate kinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.816
NOR53_944
Putative permease, MFS superfamily; [GEPR] COG0477 Permeases of the major facilitator superfamily.
       0.753
EED32090.1
Putative PyrBI operon leader peptide; [G] COG2017 Galactose mutarotase and related enzymes.
 
 
 0.710
NOR53_964
Hyaluronidase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.710
EED33431.1
SSS sodium solute transporter superfamily; [ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.689
galT
[C] COG1085 Galactose-1-phosphate uridylyltransferase.
 
   
 0.680
NOR53_32
Sucrose phosphorylase; [G] COG0366 Glycosidases.
    
 0.644
EED32632.1
Serine carboxypeptidase family protein; [E] COG2939 Carboxypeptidase C (cathepsin A).
   
 0.632
EED31837.1
[E] COG2939 Carboxypeptidase C (cathepsin A).
   
 0.632
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.