Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED32533.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (251 aa)    
Predicted Functional Partners:
merA
Mercuric reductase; [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
     0.675
NOR53_32
Sucrose phosphorylase; [G] COG0366 Glycosidases.
    
 0.585
EED33161.1
[S] COG3222 Uncharacterized protein conserved in bacteria.
 
     0.579
EED33162.1
[M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.571
EED32311.1
Conserved hypothetical protein.
 
     0.529
EED33428.1
[G] COG1874 Beta-galactosidase.
   
 
  0.526
NOR53_617
Putative esterase.
  
  
  0.499
EED32536.1
Nickel-dependent hydrogenases b-type cytochrome subunit family; [C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit.
       0.495
EED32535.1
Conserved hypothetical protein; [R] COG2391 Predicted transporter component.
       0.495
NOR53_798
Putative rhodanese domain protein; [R] COG2391 Predicted transporter component.
       0.493
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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