Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EED31107.1 | EED33224.1 | NOR53_2438 | NOR53_1716 | Carbohydrate-selective porin, OprB family. | Alkaline phosphatase; [R] COG1524 Uncharacterized proteins of the AP superfamily. | 0.407 |
EED33224.1 | EED31107.1 | NOR53_1716 | NOR53_2438 | Alkaline phosphatase; [R] COG1524 Uncharacterized proteins of the AP superfamily. | Carbohydrate-selective porin, OprB family. | 0.407 |
EED33224.1 | NOR53_398 | NOR53_1716 | NOR53_398 | Alkaline phosphatase; [R] COG1524 Uncharacterized proteins of the AP superfamily. | PEGA domain family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.411 |
EED33224.1 | NOR53_990 | NOR53_1716 | NOR53_990 | Alkaline phosphatase; [R] COG1524 Uncharacterized proteins of the AP superfamily. | Aminotransferase, class I and II; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.518 |
NOR53_398 | EED33224.1 | NOR53_398 | NOR53_1716 | PEGA domain family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Alkaline phosphatase; [R] COG1524 Uncharacterized proteins of the AP superfamily. | 0.411 |
NOR53_990 | EED33224.1 | NOR53_990 | NOR53_1716 | Aminotransferase, class I and II; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Alkaline phosphatase; [R] COG1524 Uncharacterized proteins of the AP superfamily. | 0.518 |