Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33166.1D-cysteine desulfhydrase; [E] COG0133 Tryptophan synthase beta chain. (335 aa)    
Predicted Functional Partners:
EED33167.1
[M] COG1794 Aspartate racemase.
 
  
  0.969
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
     
  0.739
EED33782.1
Thiosulfate sulfurtransferase (Rhodanese); [P] COG2897 Rhodanese-related sulfurtransferase.
     
 0.686
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
  0.647
aspC
[E] COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.647
NOR53_91
Tyrosine decarboxylase 1; [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
     
  0.647
metC
[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
     
 0.597
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
     
 0.597
EED33623.1
Aminotransferase, class I and II; [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
  
  
  0.544
EED33165.1
Hydroxylase; [R] COG3324 Predicted enzyme related to lactoylglutathione lyase.
       0.537
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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