STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33575.1Dsba oxidoreductase; [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase. (200 aa)    
Predicted Functional Partners:
EED33576.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.768
EED33217.1
Dsba oxidoreductase; [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase.
  
     0.658
EED33132.1
Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.640
NOR53_928
Antibiotic biosynthesis monooxygenase domain protein; [S] COG1359 Uncharacterized conserved protein.
  
    0.580
EED33556.1
Conserved hypothetical protein.
  
    0.536
NOR53_753
[Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; putative uncharacterized domain 1.
 
     0.530
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.520
EED32489.1
[C] COG0778 Nitroreductase.
  
     0.497
EED33530.1
[O] COG0625 Glutathione S-transferase.
  
    0.491
erg
[I] COG3000 Sterol desaturase.
       0.479
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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