STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32437.1Conserved hypothetical protein. (196 aa)    
Predicted Functional Partners:
EED32435.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
       0.651
EED32433.1
[S] COG3009 Uncharacterized protein conserved in bacteria.
       0.651
EED32434.1
Paraquat-inducible protein B; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.651
EED32436.1
ABC transporter permease protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
       0.628
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.576
EED32439.1
[M] COG3317 Uncharacterized lipoprotein.
       0.557
EED32440.1
Metallo-beta-lactamase family protein; [R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
       0.555
EED32432.1
[M] COG0668 Small-conductance mechanosensitive channel.
       0.427
EED32441.1
Hypothetical protein.
       0.422
rsmJ
Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.
       0.422
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.