STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoSCytochrome oxidase maturation protein, cbb3-type; [P] COG3197 Uncharacterized protein, possibly involved in nitrogen fixation. (59 aa)    
Predicted Functional Partners:
EED32698.1
[P] COG0474 Cation transport ATPase.
 
  
 0.893
EED32699.1
[S] COG3198 Uncharacterized protein conserved in bacteria.
 
     0.869
ccoO
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 
 0.812
ccoG
Cytochrome c oxidase accessory protein CcoG; [C] COG0348 Polyferredoxin.
 
  
 0.790
ccoN
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.781
EED32696.1
Integral membrane protein; [S] COG2836 Uncharacterized conserved protein.
 
     0.780
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.768
ccoQ
[O] COG4736 Cbb3-type cytochrome oxidase, subunit 3.
 
 
 0.748
coxB
Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.706
EED33110.1
Conserved hypothetical protein; [R] COG3313 Predicted Fe-S protein.
  
     0.507
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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