STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32397.1Geranylgeranyl reductase; [C] COG0644 Dehydrogenases (flavoproteins). (405 aa)    
Predicted Functional Partners:
EED32395.1
Chlorophyll synthase, (Polyprenyltransferase); [O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
 
 
 0.996
EED32396.1
Pucc protein; [GEPR] COG0477 Permeases of the major facilitator superfamily.
 
    0.989
NOR53_897
[I] COG1562 Phytoene/squalene synthetase.
 
 
 0.938
bchF
2-vinyl bacteriochlorophyllide hydratase.
 
  
 0.905
NOR53_743
[H] COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.900
chlD
Protoporphyrin IX Magnesium chelatase subunit ChlD; [H] COG1239 Mg-chelatase subunit ChlI.
 
  
 0.895
bchH
Magnesium chelatase, H subunit; [H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
  
 0.893
crtC
Hydroxyneurosporene synthase (CrtC).
  
 
 0.885
bchY
Chlorophyllide reductase subunit Y.
  
  
 0.872
ppsR
Transcriptional regulator PpsR; [T] COG2202 FOG: PAS/PAC domain.
 
     0.867
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.