Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EED33927.1Toxin secretion ABC transporter permease and ATP-binding protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (693 aa)    
Predicted Functional Partners:
EED33926.1
HlyD family secretion protein; [M] COG0845 Membrane-fusion protein.
 0.996
NOR53_784
Type I secretion outer membrane protein, TolC; [MU] COG1538 Outer membrane protein.
 
 
 0.903
NOR53_913
Regulatory protein, LuxR; [K] COG2771 DNA-binding HTH domain-containing proteins.
 
    0.839
EED32098.1
Type I secretion outer membrane protein, TolC; [MU] COG1538 Outer membrane protein.
  
 
 0.831
EED33922.1
[S] COG3672 Predicted periplasmic protein.
 
  
 0.822
NOR53_802
Ggdef:eal:histidine kinase, hamp region; [T] COG2200 FOG: EAL domain.
 
  
 0.746
EED33369.1
[P] COG2375 Siderophore-interacting protein.
   
  0.737
NOR53_698
[P] COG2375 Siderophore-interacting protein.
   
  0.737
NOR53_236
Secretion protein HlyD; [V] COG1566 Multidrug resistance efflux pump.
 
 0.668
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
  
 0.652
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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