STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33313.1Conserved hypothetical protein; [S] COG3767 Uncharacterized low-complexity protein. (121 aa)    
Predicted Functional Partners:
EED33312.1
[S] COG3220 Uncharacterized protein conserved in bacteria.
 
  
 0.930
EED33311.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.921
EED33905.1
DoxX family protein; [S] COG2259 Predicted membrane protein.
 
  
 0.840
NOR53_42
Conserved hypothetical protein.
  
     0.661
EED31857.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
  
     0.634
EED32548.1
Conserved hypothetical protein.
  
     0.483
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   
 0.470
NOR53_712
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.466
EED32122.1
YceI family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the UPF0312 family.
  
     0.463
hrpA
ATP-dependent helicase HrpA; [LKJ] COG0513 Superfamily II DNA and RNA helicases.
       0.455
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.