STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32760.1UspA domain protein; [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (291 aa)    
Predicted Functional Partners:
EED33336.1
[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.768
EED31440.1
Sensory transduction regulator; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.606
EED32759.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold.
    
  0.573
NOR53_968
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
   
 0.545
pspB
Phage shock protein B; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.540
NOR53_478
Hypothetical protein; [S] COG1357 Uncharacterized low-complexity proteins; pentapeptide repeat.
  
    0.534
ppk_2
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.524
EED32762.1
[S] COG2354 Uncharacterized protein conserved in bacteria.
       0.524
EED32755.1
PspC domain family protein; [KT] COG1983 Putative stress-responsive transcriptional regulator.
  
    0.502
EED32831.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.502
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.