STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33566.1Hypothetical protein; Belongs to the HpcH/HpaI aldolase family. (281 aa)    
Predicted Functional Partners:
EED31769.1
Ggdef family protein; [T] COG2199 FOG: GGDEF domain.
  
 
 0.798
EED33801.1
Rubredoxin; [C] COG1773 Rubredoxin; Belongs to the rubredoxin family.
  
  
 0.755
rubB_2
Rubredoxin reductase; [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Belongs to the FAD-dependent oxidoreductase family.
  
  
 0.755
rubB_1
[C] COG1251 NAD(P)H-nitrite reductase; Belongs to the FAD-dependent oxidoreductase family.
  
  
 0.755
EED33567.1
Hypothetical protein.
       0.603
EED33565.1
Conserved hypothetical protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family.
       0.552
EED33564.1
Gluconate 2-dehydrogenase cytochrome c subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
    0.545
EED32827.1
Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.
    
  0.536
NOR53_589
Sensory box histidine kinase.
    
  0.536
NOR53_629
Sensory box/ggdef domain protein; [T] COG2199 FOG: GGDEF domain.
    
  0.536
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.