STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED34027.1Carboxylesterase 1; [R] COG0400 Predicted esterase. (221 aa)    
Predicted Functional Partners:
EED31840.1
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
     
 0.578
EED31765.1
Phospholipase, patatin family; [R] COG3621 Patatin.
    
  0.570
EED34028.1
Conserved hypothetical protein; [S] COG3016 Uncharacterized iron-regulated protein.
       0.482
NOR53_192
Hypothetical protein.
     
 0.480
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.480
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
   
 
  0.456
NOR53_530
Cell division protein FtsA; [G] COG0524 Sugar kinases, ribokinase family.
   
 
  0.456
EED31733.1
Patatin; [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
 
  
  0.444
napA_2
[P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
       0.406
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.