STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32969.1Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit. (563 aa)    
Predicted Functional Partners:
EED31467.1
[C] COG2863 Cytochrome c553.
   
 0.962
EED32968.1
Beta-lactamase domain protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
 
 
  0.954
sulP
[R] COG2252 Permeases.
 
    0.880
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.852
EED31694.1
[F] COG0167 Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family.
  
 
 0.796
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.795
EED34004.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 0.789
NOR53_175
Cytochrome c, class I; [C] COG2863 Cytochrome c553.
   
 0.789
EED31151.1
cytoChrome c, class I; [C] COG2863 Cytochrome c553.
   
 0.789
EED32071.1
[C] COG2010 Cytochrome c, mono- and diheme variants.
   
 0.789
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.