Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED32693.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
EED32690.1
BolA family protein; [T] COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
       0.675
EED32691.1
Conserved hypothetical protein; [R] COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family.
       0.675
ilvB_1
Acetolactate synthase large subunit; [R] COG3960 Glyoxylate carboligase; Belongs to the TPP enzyme family.
       0.675
NOR53_707
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.487
EED32688.1
RDD; [S] COG1714 Predicted membrane protein/domain.
       0.481
amiB
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
    
 0.477
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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