STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33753.1Polysaccharide biosynthesis protein; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases. (678 aa)    
Predicted Functional Partners:
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.952
NOR53_220
Cell wall biogenesis protein (WbpE); [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.905
NOR53_875
Glycosyl transferase, group 4 family protein; [M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
  
 0.893
galE_2
UDP-glucose 4-epimerase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
 0.885
EED31998.1
Aminotransferase; [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.881
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.799
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
  
 
 0.774
EED32008.1
[M] COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.769
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.767
EED31331.1
Transcriptional regulator, XRE family; [K] COG1396 Predicted transcriptional regulators.
  
 
 0.766
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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