NOR53_183 protein (gamma proteobacterium NOR53)

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NOR53_183

[R] COG0733 Na+-dependent transporters of the SNF family. (447 aa)

Predicted Functional Partners:

NOR53_134

0.733

NOR53_49

0.690

ribD

0.578

udk

0.576

smpB

0.568

Your Current Organism:

gamma proteobacterium NOR53

NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NOR53_134	NOR53_183	NOR53_134	NOR53_183	Polyketide cyclase/dehydrase family protein; [I] COG2867 Oligoketide cyclase/lipid transport protein.	[R] COG0733 Na+-dependent transporters of the SNF family.	0.733
NOR53_134	NOR53_49	NOR53_134	NOR53_49	Polyketide cyclase/dehydrase family protein; [I] COG2867 Oligoketide cyclase/lipid transport protein.	[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.	0.933
NOR53_134	smpB	NOR53_134	NOR53_30	Polyketide cyclase/dehydrase family protein; [I] COG2867 Oligoketide cyclase/lipid transport protein.	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	0.621
NOR53_183	NOR53_134	NOR53_183	NOR53_134	[R] COG0733 Na+-dependent transporters of the SNF family.	Polyketide cyclase/dehydrase family protein; [I] COG2867 Oligoketide cyclase/lipid transport protein.	0.733
NOR53_183	NOR53_49	NOR53_183	NOR53_49	[R] COG0733 Na+-dependent transporters of the SNF family.	[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.	0.690
NOR53_183	ribD	NOR53_183	NOR53_268	[R] COG0733 Na+-dependent transporters of the SNF family.	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.	0.578
NOR53_183	smpB	NOR53_183	NOR53_30	[R] COG0733 Na+-dependent transporters of the SNF family.	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	0.568
NOR53_183	udk	NOR53_183	NOR53_1691	[R] COG0733 Na+-dependent transporters of the SNF family.	Uridine kinase; [H] COG1072 Panthothenate kinase.	0.576
NOR53_49	NOR53_134	NOR53_49	NOR53_134	[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.	Polyketide cyclase/dehydrase family protein; [I] COG2867 Oligoketide cyclase/lipid transport protein.	0.933
NOR53_49	NOR53_183	NOR53_49	NOR53_183	[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.	[R] COG0733 Na+-dependent transporters of the SNF family.	0.690
NOR53_49	smpB	NOR53_49	NOR53_30	[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	0.599
ribD	NOR53_183	NOR53_268	NOR53_183	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.	[R] COG0733 Na+-dependent transporters of the SNF family.	0.578
ribD	udk	NOR53_268	NOR53_1691	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.	Uridine kinase; [H] COG1072 Panthothenate kinase.	0.766
smpB	NOR53_134	NOR53_30	NOR53_134	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	Polyketide cyclase/dehydrase family protein; [I] COG2867 Oligoketide cyclase/lipid transport protein.	0.621
smpB	NOR53_183	NOR53_30	NOR53_183	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	[R] COG0733 Na+-dependent transporters of the SNF family.	0.568
smpB	NOR53_49	NOR53_30	NOR53_49	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.	0.599
udk	NOR53_183	NOR53_1691	NOR53_183	Uridine kinase; [H] COG1072 Panthothenate kinase.	[R] COG0733 Na+-dependent transporters of the SNF family.	0.576
udk	ribD	NOR53_1691	NOR53_268	Uridine kinase; [H] COG1072 Panthothenate kinase.	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.	0.766