STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33652.1[P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (285 aa)    
Predicted Functional Partners:
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.691
EED31208.1
[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.660
NOR53_908
[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.657
EED31623.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.571
EED33345.1
Conserved hypothetical protein; [R] COG0730 Predicted permeases.
  
     0.566
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.521
EED31474.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.502
EED31327.1
Toxin secretion ABC transporter ATP-binding protein; [CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.
  
     0.467
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.435
EED31200.1
Prolyl oligopeptidase family protein; [E] COG1505 Serine proteases of the peptidase family S9A.
  
     0.432
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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