STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33562.1Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (519 aa)    
Predicted Functional Partners:
EED33561.1
SapC family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.945
NOR53_979
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.945
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.891
EED31609.1
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.776
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
     
 0.743
EED33674.1
[I] COG0657 Esterase/lipase.
  
 0.693
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    
0.678
EED31895.1
Transcriptional regulator, ArsR family; [K] COG0640 Predicted transcriptional regulators.
  
 
  0.583
erg
[I] COG3000 Sterol desaturase.
   
 0.568
NOR53_349
[I] COG3000 Sterol desaturase.
   
 0.568
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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