STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32965.1TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1008 aa)    
Predicted Functional Partners:
EED32967.1
Zinc carboxypeptidase family; [E] COG2866 Predicted carboxypeptidase.
 
     0.804
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
  
 0.703
EED31834.1
[P] COG4772 Outer membrane receptor for Fe3+-dicitrate.
  
  
  0.653
EED32966.1
D-aminoacylase (N-acyl-D-amino-acid deacylase); [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.613
EED32963.1
Conserved hypothetical protein.
 
     0.586
EED33348.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.576
EED33568.1
[S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.569
EED33230.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.538
EED32498.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.534
EED32862.1
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.525
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.