Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32965.1TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1008 aa)    
Predicted Functional Partners:
EED32967.1
Zinc carboxypeptidase family; [E] COG2866 Predicted carboxypeptidase.
 
     0.804
EED32644.1
Porin.
    
 0.717
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
  
 0.698
EED31834.1
[P] COG4772 Outer membrane receptor for Fe3+-dicitrate.
  
     0.649
NOR53_927
Type V secretory pathway, adhesin AidA; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
  0.623
EED32966.1
D-aminoacylase (N-acyl-D-amino-acid deacylase); [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.613
NOR53_784
Type I secretion outer membrane protein, TolC; [MU] COG1538 Outer membrane protein.
     
 0.602
EED32963.1
Conserved hypothetical protein.
 
     0.590
EED33348.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.576
EED33568.1
[S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.569
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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