Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED33471.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
EED33473.1
[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
       0.784
EED33472.1
Putative thiol-disulphide oxidoreductase DCC; [S] COG3011 Uncharacterized protein conserved in bacteria.
       0.784
fabK
trans-2-enoyl-ACP reductase II; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.508
NOR53_987
Conserved hypothetical protein.
       0.475
EED33475.1
Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel.
       0.465
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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