STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33271.1Phage-related protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (1007 aa)    
Predicted Functional Partners:
EED33270.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.783
EED33272.1
Hypothetical protein.
       0.773
NOR53_965
Hypothetical protein.
       0.773
EED31763.1
Glycolipid ABC exporter (DevE) family, permease protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.708
EED31302.1
Putative RecF/RecN/SMC N terminal domain; [D] COG1196 Chromosome segregation ATPases.
  
     0.684
EED31235.1
Conserved hypothetical protein; [E] COG1748 Saccharopine dehydrogenase and related proteins.
  
     0.641
EED34058.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.533
EED31764.1
Transporter, MFP family; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.514
dndD
DNA sulfur modification protein DndD; [L] COG0419 ATPase involved in DNA repair.
  
     0.510
dndC
Putative sulfurtransferase DndC; [EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes.
  
     0.509
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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