STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33472.1Putative thiol-disulphide oxidoreductase DCC; [S] COG3011 Uncharacterized protein conserved in bacteria. (164 aa)    
Predicted Functional Partners:
EED33473.1
[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
       0.799
EED33471.1
Hypothetical protein.
       0.782
fabK
trans-2-enoyl-ACP reductase II; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.511
EED33181.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.490
NOR53_987
Conserved hypothetical protein.
       0.484
EED33475.1
Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel.
       0.465
NOR53_967
Methyltransferase type 11; [QR] COG0500 SAM-dependent methyltransferases.
  
 
  0.461
NOR53_523
Conserved hypothetical protein; [F] COG0563 Adenylate kinase and related kinases.
  
     0.458
EED33513.1
Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.436
NOR53_966
Conserved hypothetical protein.
 
     0.417
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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