STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32949.1Putative alpha-L-glutamate ligase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (327 aa)    
Predicted Functional Partners:
EED32948.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.956
NOR53_877
ATP-dependent Zn protease; [O] COG4067 Uncharacterized protein conserved in archaea.
 
     0.933
cphA
Cyanophycin synthetase; [M] COG0769 UDP-N-acetylmuramyl tripeptide synthase.
    
 0.575
EED31562.1
Methyltransferase type 11; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.506
EED33091.1
Putative glutaredoxin domain family protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.443
EED32685.1
[L] COG2927 DNA polymerase III, chi subunit.
  
     0.425
sucA
[C] COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
    
 0.416
pepA
Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.411
EED32715.1
Anti-sigma factor MucA; [T] COG3073 Negative regulator of sigma E activity.
  
     0.409
EED31787.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
 0.408
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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